A Method for Comprehensive Glycosite-Mapping and Direct Quantitation of Serum Glycoproteins (2015)
Qiuting Hong, L. Renee Ruhaak, Carol Stroble, Evan Parker, Jincui Huang, Emanual Maverakis, Carlito B. Lebrilla
J Proteome Res, 2015 vol.14(12):5179-5192
SNFG,
Text,
Oxford
taxonomy (1)
protein (5)
source (1)
structure (21)
composition (21)
disease (1)
reference (1)
site (9)
peptide (0)
- Homo sapiens (Human)
Taxonomy
- Immunoglobulin alpha (non secretory) / Homo sapiens P01877 P01876
- Immunoglobulin heavy constant alpha 1 / Homo sapiens P01876
- Immunoglobulin heavy constant alpha 2 / Homo sapiens P01877
- Immunoglobulin heavy constant mu / Homo sapiens P01871
- Immunoglobulin J chain / Homo sapiens P01591
Protein
- Blood Serum (UBERON_0001977)
Source
- N-Linked / Complex / Structure 2719
- N-Linked / Complex / Structure 2104
- N-Linked / Complex / Gal(?1-?)GlcNAc(?1-?)Man(a1-3)[Gal(?1-?)GlcNAc(?1-?)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-6)]GlcNAc
- N-Linked / Complex / Structure 10049
- N-Linked / Complex / Structure 1147
- N-Linked / Complex / Structure 3507
- N-Linked / Complex / Structure 2437
- N-Linked / Complex / Structure 3446
- N-Linked / Complex / Structure 1523
- N-Linked / Complex / Structure 289
- N-Linked / Complex / NeuAc(?2-?)Gal(?1-?)GlcNAc(?1-?)Man(a1-3)[NeuAc(?2-?)Gal(?1-?)GlcNAc(?1-?)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / Complex / Structure 1149
- N-Linked / Complex / Structure 1519
- N-Linked / Complex / Structure 2089
- N-Linked / Complex / Structure 350
- N-Linked / High-Mannose / Man(a1-3)[Man(a1-6)]Man(a1-6)[Man(a1-3)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / High-Mannose / Man(a1-3)[Man(a1-6)]Man(a1-6)[Man(a1-2)Man(a1-3)]Man(b1-4)GlcNAc(b1-4)GlcNAc
- N-Linked / High-Mannose / Structure 314
- N-Linked / High-Mannose / Structure 2636
- N-Linked / High-Mannose / Structure 10029
- N-Linked / Hybrid / Structure 1713
Reported structure
- Hex:4 HexNAc:4 dHex:1 (avg mass : 1625.5079 )
- Hex:4 HexNAc:5 (avg mass : 1682.5599 )
- Hex:4 HexNAc:5 NeuAc:1 (avg mass : 1973.8178 )
- Hex:4 HexNAc:5 dHex:1 (avg mass : 1828.7029 )
- Hex:5 HexNAc:2 (avg mass : 1235.1173 )
- Hex:5 HexNAc:3 (avg mass : 1438.3123 )
- Hex:5 HexNAc:4 NeuAc:1 (avg mass : 1932.7652 )
- Hex:5 HexNAc:4 NeuAc:2 (avg mass : 2224.0231 )
- Hex:5 HexNAc:4 dHex:1 (avg mass : 1787.6503 )
- Hex:5 HexNAc:4 dHex:1 NeuAc:1 (avg mass : 2078.9082 )
- Hex:5 HexNAc:4 dHex:1 NeuAc:2 (avg mass : 2370.1661 )
- Hex:5 HexNAc:5 (avg mass : 1844.7023 )
- Hex:5 HexNAc:5 NeuAc:1 (avg mass : 2135.9602 )
- Hex:5 HexNAc:5 dHex:1 (avg mass : 1990.8453 )
- Hex:5 HexNAc:5 dHex:1 NeuAc:1 (avg mass : 2282.1032 )
- Hex:5 HexNAc:5 dHex:1 NeuAc:2 (avg mass : 2573.3611 )
- Hex:6 HexNAc:2 (avg mass : 1397.2597 )
- Hex:6 HexNAc:5 dHex:1 NeuAc:1 (avg mass : 2444.2456 )
- Hex:7 HexNAc:2 (avg mass : 1559.4021 )
- Hex:8 HexNAc:2 (avg mass : 1721.5445 )
- Hex:9 HexNAc:2 (avg mass : 1883.6869 )
Composition
- Control/Healthy
Disease
- Immunoglobulin alpha (non secretory) / Homo sapiens
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
- Immunoglobulin heavy constant mu / Homo sapiens
- Immunoglobulin J chain / Homo sapiens
Reported glycosite
Mass spectrometry observed peptide
-
- N-Linked / Complex
(avg mass : 1625.5079)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
-
- N-Linked / Complex
(avg mass : 1682.5599)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin alpha (non secretory) / Homo sapiens
-
- N-Linked / Complex
(avg mass : 1787.6503)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
-
- N-Linked / Complex
(avg mass : 1828.7029)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
-
- N-Linked / Complex
(avg mass : 1844.7023)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin alpha (non secretory) / Homo sapiens
-
- N-Linked / Complex
(avg mass : 1932.7652)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin alpha (non secretory) / Homo sapiens
- Immunoglobulin J chain / Homo sapiens
-
- N-Linked / Complex
(avg mass : 1973.8178)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin alpha (non secretory) / Homo sapiens
-
- N-Linked / Complex
(avg mass : 1990.8453)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
-
- N-Linked / Complex
(avg mass : 2078.9082)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
- Immunoglobulin heavy constant mu / Homo sapiens
- Immunoglobulin J chain / Homo sapiens
-
- N-Linked / Complex
(avg mass : 2135.9602)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin alpha (non secretory) / Homo sapiens
- Immunoglobulin heavy constant mu / Homo sapiens
-
- N-Linked / Complex
(avg mass : 2224.0231)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin alpha (non secretory) / Homo sapiens
-
- N-Linked / Complex
(avg mass : 2282.1032)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
- Immunoglobulin heavy constant mu / Homo sapiens
-
- N-Linked / Complex
(avg mass : 2370.1661)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
- Immunoglobulin heavy constant mu / Homo sapiens
- Immunoglobulin J chain / Homo sapiens
-
- N-Linked / Complex
(avg mass : 2444.2456)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
-
- N-Linked / Complex
(avg mass : 2573.3611)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant alpha 1 / Homo sapiens
- Immunoglobulin heavy constant alpha 2 / Homo sapiens
- Immunoglobulin heavy constant mu / Homo sapiens
-
- N-Linked / High-Mannose
(avg mass : 1235.1173)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant mu / Homo sapiens
-
- N-Linked / High-Mannose
(avg mass : 1397.2597)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant mu / Homo sapiens
-
- N-Linked / High-Mannose
(avg mass : 1559.4021)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant mu / Homo sapiens
-
- N-Linked / High-Mannose
(avg mass : 1721.5445)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant mu / Homo sapiens
-
- N-Linked / High-Mannose
(avg mass : 1883.6869)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant mu / Homo sapiens
-
- N-Linked / Hybrid
(avg mass : 1438.3123)
- Blood Serum (UBERON_0001977)
- Control/Healthy
- Immunoglobulin heavy constant mu / Homo sapiens
Source
Disease
Reported glycosite
- N-Linked / Hybrid
(avg mass : 1438.3123)
Source
Disease
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1883.6869)
Source
Disease
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1721.5445)
Source
Disease
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1559.4021)
Source
Disease
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1397.2597)
Source
Disease
Reported glycosite
- N-Linked / High-Mannose
(avg mass : 1235.1173)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2573.3611)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2444.2456)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2370.1661)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2282.1032)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2224.0231)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2135.9602)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 2078.9082)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 1990.8453)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 1973.8178)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 1932.7652)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 1844.7023)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 1828.7029)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 1787.6503)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 1682.5599)
Source
Disease
Reported glycosite
- N-Linked / Complex
(avg mass : 1625.5079)
