No-core glycan structure

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3D structure from GLYCAM

Cross-references

GlyTouCan : G55061AW

GlyGen : G55061AW

ChEBI : 151231


Composition

Hex:3 HexNAc:3


IUPAC

GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dman-HEX-1:5
4b:a-dman-HEX-1:5
5b:b-dglc-HEX-1:5
6s:n-acetyl
7b:a-dman-HEX-1:5
8b:b-dglc-HEX-1:5
9s:n-acetyl
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3o(3+1)4d
4:4o(2+1)5d
5:5d(2+1)6n
6:3o(6+1)7d
7:7o(2+1)8d
8:8d(2+1)9n

GWS

freeEnd--?b1D-GlcNAc,p--4b1Man(--3a1Man--2b1D-GlcNAc,p)--6a1Man--2b1D-GlcNAc,p$MONO,Und,0,0,freeEnd

Glycam

DGlcpNAcb1-2DManpa1-3[DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-OH

SMILES

CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O[C@H]2[C@H]([C@H]([C@@H]([C@H](O2)CO[C@@H]3[C@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)NC(=O)C)O)O[C@@H]5[C@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)NC(=O)C)O)O

InCHI key

JVQHRPJHXXZJKS-NKPXFWKGSA-N

InCHI

InChI=1S/C42H71N3O31/c1-10(51)43-19-29(61)33(17(8-50)67-37(19)65)73-40-32(64)34(74-42-36(31(63)25(57)16(7-49)71-42)76-39-21(45-12(3)53)28(60)23(55)14(5-47)69-39)26(58)18(72-40)9-66-41-35(30(62)24(56)15(6-48)70-41)75-38-20(44-11(2)52)27(59)22(54)13(4-46)68-38/h13-42,46-50,54-65H,4-9H2,1-3H3,(H,43,51)(H,44,52)(H,45,53)/t13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23-,24-,25-,26-,27-,28-,29-,30+,31+,32+,33-,34+,35+,36+,37-,38+,39+,40+,41+,42-/m1/s1