Pauci-Mannose glycan structure

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structure 1043
N-Linked / Pauci-Mannose (avg mass : 1203.1185)

3D structure from GLYCAM

Cross-references

GlyTouCan : G11460AB

GlyGen : G11460AB

ChEBI : 147577


Composition

Hex:3 HexNAc:2 dHex:2


IUPAC

Man(a1-3)[Man(a1-6)]Man(b1-4)GlcNAc(b1-4)[Fuc(a1-3)][Fuc(a1-6)]GlcNAc

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:a-lgal-HEX-1:5|6:d
4b:b-dglc-HEX-1:5
5s:n-acetyl
6b:b-dman-HEX-1:5
7b:a-dman-HEX-1:5
8b:a-dman-HEX-1:5
9b:a-lgal-HEX-1:5|6:d
LIN
1:1d(2+1)2n
2:1o(3+1)3d
3:1o(4+1)4d
4:4d(2+1)5n
5:4o(4+1)6d
6:6o(3+1)7d
7:6o(6+1)8d
8:1o(6+1)9d

GWS

freeEnd--?b1D-GlcNAc,p((--3a1L-Fuc,p)--4b1D-GlcNAc,p--4b1Man(--3a1Man)--6a1Man)--6a1L-Fuc,p$MONO,Und,0,0,freeEnd

Glycam

DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-3][LFucpa1-6]DGlcpNAcb1-OH

SMILES

C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)OC[C@@H]2[C@H]([C@@H]([C@H]([C@@H](O2)O)NC(=O)C)O[C@H]3[C@H]([C@@H]([C@@H]([C@@H](O3)C)O)O)O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O[C@H]5[C@H]([C@H]([C@@H]([C@H](O5)CO[C@@H]6[C@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)O)O[C@@H]7[C@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)O)O)NC(=O)C)O)O)O

InCHI key

ADFUQTFQNHKJBU-OHSZZDGYSA-N

InCHI

InChI=1S/C46H78N2O34/c1-10-21(54)27(60)31(64)42(72-10)71-9-18-37(38(20(40(69)74-18)48-13(4)53)81-44-33(66)28(61)22(55)11(2)73-44)80-41-19(47-12(3)52)26(59)36(16(7-51)77-41)79-46-35(68)39(82-45-34(67)30(63)24(57)15(6-50)76-45)25(58)17(78-46)8-70-43-32(65)29(62)23(56)14(5-49)75-43/h10-11,14-46,49-51,54-69H,5-9H2,1-4H3,(H,47,52)(H,48,53)/t10-,11-,14+,15+,16+,17+,18+,19+,20+,21+,22+,23+,24+,25+,26+,27+,28+,29-,30-,31-,32-,33-,34-,35-,36+,37+,38+,39-,40+,41-,42+,43-,44-,45+,46-/m0/s1